miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|169926794|gb|FE738514.1|FE738514 GNCNNNNNNAGCGGCAGCCGGGCGATGGCGAGGAGCCGGGCNNCTTACGAGTACACGGAGGCGGAGGACAAGAGCATGCG
GCTGGGTTTCCTCCTCATCGCCGCCGGCTTGCTTTCCCTCTTGGGTTTGGGTTGTTGCTGGCTTCGCCCGGCGCTGCAGG
AGCGGGGCGGCGGCGGCTCCGCCAACTGCACGGTGCTGGCGGTGCGGCAGCTGGGGGAGCGCTTCGCCTGCACCTTCTCC
TGCGGGGCCGCCTGCCGCGGCACCGCCCGCTACCCCTGCCTCCAGGTGCTGGTCCGCACCTCCCGCTCCTCCGCACCCGC
CCTGCTCCATGAGGACGAGCGGCAGCTGCGCACCAACCCCAAGTGCTCATACATCCCTCCCTGTGCAAGAGATGATCAGG
AGAACTCTGAGAACGTCACGTACAAGCAGAAATACTGGAAAGAGAAAGTGGGTTCTCAACCATTTACGTGCTATTTTAAC
CAGCACTTGAGGCCGGATGATGTGATGCTGAAGCGCACCCATGATGAGACTGTTCTCTTGCACTGCTTCCTCTGGCCCGT
GGTGACTTTCCTGGTTGGAGTCCTCATCGTGGTCCTGACCATCTGTGCCAAGAGCTTGGCTA




Most similar to sp|Q86W47|KCMB4_HUMAN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q86W47|KCMB4_HUMAN Calcium-activated potassium channel subunit
           beta-4 OS=Homo sapiens GN=KCNMB4 PE=1 SV=2
          Length = 210

 Score =  236 bits (603), Expect = 7e-62
 Identities = 113/192 (58%), Positives = 133/192 (69%)
 Frame = +1

Query: 46  YEYTEAEDKSMRXXXXXXXXXXXXXXXXXCCWLRPALQERGGGGSANCTVLAVRQLGERF 225
           YEYTEAEDKS+R                  CWL PALQ+      ANCTVL+V+Q+GE F
Sbjct: 8   YEYTEAEDKSIRLGLFLIISGVVSLFIFGFCWLSPALQDLQAT-EANCTVLSVQQIGEVF 66

Query: 226 ACTFSCGAACRGTARYPCLQVLVRTSRSSAPALLHEDERQLRTNPKCSYIPPCARDDQEN 405
            CTF+CGA CRGT++YPC+QV V  S S++ ALLH DE QL TNPKCSYIPPC R++Q+N
Sbjct: 67  ECTFTCGADCRGTSQYPCVQVYVNNSESNSRALLHSDEHQLLTNPKCSYIPPCKRENQKN 126

Query: 406 SENVTYKQKYWKEKVGSQPFTCYFNQHLRPDDVMLKRTHDETVLLHCFLWPXXXXXXXXX 585
            E+V   Q+YWK+++GSQPFTCYFNQH RPDDV+L RTHDE VLLHCFLWP         
Sbjct: 127 LESVMNWQQYWKDEIGSQPFTCYFNQHQRPDDVLLHRTHDEIVLLHCFLWPLVTFVVGVL 186

Query: 586 XXXXXXCAKSLA 621
                 CAKSLA
Sbjct: 187 IVVLTICAKSLA 198